Prof. R. Sowdhamini - Useful Links
Sequence Searches:
Genquest
Amos'WWW links page
Sequence Retrieval System at EMBL
Bic_SW - EBI
PPSEARCH European Bioinformatics Institute
Pratt EBI
Division Of Mathematical Biology
Database scanning
Sequence Alignment:
Structure Prediction:
CrystalStrucKinesin & ncd
European Molecular Biology Laboratory
Comparison of protein structures:SARF2
Department of Biochemistry & Molecular Biology, London
CATH Classification
Structural Classification Of Proteins
Protein Topology Home Page, EBI
Jpred - A Consensus Secondary Structure Prediction Server
PDBsum
Kinesin HomePage
PROCHECK - protein structure checks
PredictProtein: structure prediction & sequence analysis
Phylogenetic Analysis:
Motifs:
Searching Protein & Nucleic Acid Sequence Motifs
Motif e-mail Server
FASTA-PAT Search of a Pattern Database
PatScan
Fold Prediction:
UCLA-DOE Benchmark for Fold Recognition Methods
Threader :Fold Recognition by Optimal Protein Sequence Threading
People and Places:
School of the Biological Sciences,University of Cambridge
National Centre for Biological Sciences, Bangalore
Cyrus Chothia
Tom L.Blundell
John Kuriyan
Pedro's Biomolecular Research Tools
Viseur's Home page
EMBL Outstation,Hinxton
Tutorials:
Databases:
CAMbridge database of Protein Alignments : CAMPASS
HOMSTRAD : Homologous Structure Alignment Database
PROSITE : Database of Protein families & domains
The ProDom protein domain database
ExPASy - SWISS-PROT and TrEMBL
Guide to the Saccharomyces Genome Database
HIV sequence database
The Mycoplasma genitalium Genome Database
Journals:
Journal of Molecular Biology
PubMed Journal Browser
Biophysical Journal
Misc:
Links2Go:algorithms for molecular biology
Computer Science Bibliography
ExPASy - Tools
E.coli Genome Center
Whitehead Institute Center for Genome Research
SGD Glossary Terms
GenomeNet WWW server
The Sanger Center : C.elegans Project
WU GSC : Genome Sequencing Center
Genomatix Software GmbH : Functional Genomics
Gene Identification Software sites
De Cypher Bioinformatics Accelerator Algorithm List
JalView - Java alignment editor
Computational Services at the EMBL
Tools for Computational Biology
GeneFormatics