Author Title Type [ Year(Desc)]
2021
Dhanya SK, Hasan G.  2021.  Purkinje neurons with loss of STIM1 exhibit age-dependent changes in gene expression and synaptic components. J Neurosci..
Das A, Yadav A, Gupta M, R P, Terse VL, Vishvakarma V, Singh S, Nandi T, Banerjee A, Mandal K et al..  2021.  Rational Design of Protein-Specific Folding Modifiers.. J Am Chem Soc.
Khan A, Krishna S.M., Ramakrishnan U, Das R.  2021.  Recapitulating whole genome based population genetic structure for Indian wild tigers through an ancestry informative marker panel. Heredity (Edinb).
Armstrong EE, Khan A, Taylor RW, Gouy A, Greenbaum G, Thiéry A, Kang JTL, Redondo SA, Prost S, Barsh G et al..  2021.  Recent evolutionary history of tigers highlights contrasting roles of genetic drift and selection.. Mol Biol Evol.
Gerkin RC, Ohla K, Veldhuizen MG, Joseph PV, Kelly CE, Bakke AJ, Steele KE, Farruggia MC, Pellegrino R, Pepino MY et al..  2021.  Recent smell loss is the best predictor of COVID-19 among individuals with recent respiratory symptoms. Chem Senses. 46
Subrahmanyam R, Dwivedi D, Rashid Z, Bonnycastle K, Cousin MA, Chattarji S.  2021.  Reciprocal regulation of spontaneous synaptic vesicle fusion by Fragile X mental retardation protein and group I metabotropic glutamate receptors.. J Neurochem.
Patil S, Palande A, Lodhiya T, Pandit A, Mukherjee R.  2021.  Redefining genetic essentiality in Mycobacterium tuberculosis.. Gene. 765:145091.
Patel D, Anilkumar S, Chattarji S, de Boer SF, Buwalda B.  2021.  Repeated victorious and defeat experiences induce similar apical dendritic spine remodeling in CA1 hippocampus of rats.. Behav Brain Res. 406:113243.
Bhatia S, Krishnamoorthy G, Udgaonkar JB.  2021.  Resolving Site-Specific Heterogeneity of the Unfolded State under Folding Conditions.. J Phys Chem Lett. :3295-3302.
Raghurama M, Sankaran M.  2021.  Restoring tropical forest–grassland mosaics invaded by woody exotics. Restor Ecol .
Tait C, Kharva H, Schubert M, Kritsch D, Sombke A, Rybak J, Feder JL, Olsson SB.  2021.  A reversal in sensory processing accompanies ongoing ecological divergence and speciation in .. Proc Biol Sci. 288(1947):20210192.
Phan QToan, Yokoi N, Makbun N, Joshi S, Subramanian KA, Ngo QPhu, Dow RA.  2021.  A review of the Drepanosticta carmichaeli-group, with the description of D. wildermuthi sp. nov. from the Central Highlands of Vietnam (Odonata: Zygoptera: Platystictidae).. Zootaxa. 5067(2):187-210.
Pachamuthu K, Swetha C, Basu D, Das S, Singh I, Sundar VHari, Sujith TN, Shivaprasad PV.  2021.  Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes.. Plant Mol Biol. 105(1-2):99-114.
Jeancolas C, Matsubara YJ, Vybornyi M, Lambert CN, Blokhuis A, Alline T, Griffiths AD, Ameta S, Krishna S, Nghe P.  2021.  RNA diversification by a self-reproducing ribozyme revealed by deep sequencing and kinetic modelling.. Chem Commun (Camb).
Jayakumar JAnand Kuma, Panicker MM.  2021.  The roles of serotonin in cell adhesion and migration, and cytoskeletal remodeling.. Cell Adh Migr. 15(1):261-271.
Chakraborty P, Chattarji S, Jeanneteau F.  2021.  A salience hypothesis of stress in PTSD.. Eur J Neurosci.
Chatterjee A, Bais D, Brockmann A, Ramesh D.  2021.  Search Behavior of Individual Foragers Involves Neurotransmitter Systems Characteristic for Social Scouting. Front. Insect Sci.
Krishnadas M, Sankaran M, Page N, Joshi J, Machado S, Nataraj N, Chengappa SK, Kumar V, Kumar A, Krishnamani R et al..  2021.  Seasonal drought regulates species distributions and assembly of tree communities across a tropical wet forest region. GLOBAL ECOLOGY AND BIOGEOGRAPHY.
Srivastava T, Kumar A.  2021.  Seasonal forage and diet quality in two subtropical ungulates in the Himalaya. European Journal Of Wildlife Research. 67(4)
Bawa KS, Sengupta A, Chavan V, Chellam R, Ganesan R., Krishnaswamy J, Mathur VB, Nawn N, Olsson SB, Pandit N et al..  2021.  Securing biodiversity, securing our future: A national mission on biodiversity and human well-being for India. BIOLOGICAL CONSERVATION. 253(108867)
Gopal A, Mudappa D, Raman TRS, Naniwadekar R.  2021.  Seed fates of four rainforest tree species in the fragmented forests of Anamalais in the southern Western Ghats, India. ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY. (103698)
Ameta S, Matsubara YJ, Chakraborty N, Krishna S, Thutupalli S.  2021.  Self-Reproduction and Darwinian Evolution in Autocatalytic Chemical Reaction Systems.. Life (Basel). 11(4)
Gupta K, Chattarji S.  2021.  Sex differences in the delayed impact of acute stress on the amygdala.. Neurobiol Stress. 14:100292.
Olona A, Hateley C, Muralidharan S, Wenk MR, Torta F, Behmoaras J.  2021.  Sphingolipid metabolism during TLR4-mediated macrophage activation.. Br J Pharmacol.
Prabhakara C, Godbole R, Sil P, Jahnavi S, Gulzar S-E-J, van Zanten TS, Sheth D, Subhash N, Chandra A, Shivaraj A et al..  2021.  Strategies to target SARS-CoV-2 entry and infection using dual mechanisms of inhibition by acidification inhibitors.. PLoS Pathog. 17(7):e1009706.
Tomar A, Polygalov D, Chattarji S, McHugh TJ.  2021.  Stress enhances hippocampal neuronal synchrony and alters ripple-spike interaction.. Neurobiol Stress. 14:100327.
Shukla A, Chattarji S.  2021.  Stressed rats fail to exhibit avoidance reactions to innately aversive social calls.. Neuropsychopharmacology.
Dongre AVilas, Das S, Bellur A, Kumar S, Chandrashekarmath A, Karmakar T, Balaram P, Balasubramanian S, Balaram H.  2021.  Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.. Biophys J.
Bhattacharjee R, Udgaonkar JB.  2021.  Structural Characterization of the Cooperativity of Unfolding of a Heterodimeric Protein Using Hydrogen Exchange-Mass Spectrometry.. J Mol Biol. :167268.
Hao X, Parmar JJ, Lelandais B, Aristov A, Ouyang W, Weber C, Zimmer C.  2021.  Super-resolution visualization and modeling of human chromosomal regions reveals cohesin-dependent loop structures.. Genome Biol. 22(1):150.
HarshaRani GV, Moza S, Ramakrishnan N, Bhalla US.  2021.  SWITCHES: Searchable web interface for topologies of CHEmical switches.. Bioinformatics.
Gowande G, Bhosale H, Phansalkar P, Sawant M, Mirza ZA.  2021.  On the systematics and the phylogenetic position of the poorly known, montane dragon-lizard species Pseudocalotes austeniana (Annandale, 1908) (Squamata, Agamidae, Draconinae). Evolutionary Systematics. 5(1):141-150.
Heltberg ML, Krishna S, Kadanoff LP, Jensen MH.  2021.  A tale of two rhythms: Locked clocks and chaos in biology.. Cell Syst. 12(4):291-303.
Caleb JTD, Sanap RV, Prajapati DA, Bambhaniya P.  2021.  Taxonomic notes on two jumping spider species of the genus Epocilla Thorell, 1887 (Araneae: Salticidae: Chrysillini) from India and Pakistan. ARTHROPODA SELECTA . 30:221-229.
Young A.M., Kohl P.L., Rutschmann B., teffen-Dewenter I, Brockmann A.  2021.  Temporal and spatial foraging patterns of three Asian honey bee species in Bangalore, India. Apidologie .
Blobel GA, Higgs DR, Mitchell JA, Notani D, Young RA.  2021.  Testing the super-enhancer concept.. Nat Rev Genet.
Subaharan K, Senthoorraja R, Manjunath S, Thimmegowda GG, Pragadheesh VS, Bakthavatsalam N, Mohan MG, Senthil-Nathan S, David KJ, Basavarajappa S et al..  2021.  Toxicity, behavioural and biochemical effect of Piper betle L. essential oil and its constituents against housefly, Musca domestica L.. Pestic Biochem Physiol. 174(104804)
Mondal S, Dubey J, Awasthi A, Sure GReddy, Vasudevan A, Koushika SP.  2021.  Tracking mitochondrial density and positioning along a growing neuronal process in individual neuron using a long-term growth and imaging microfluidic device.. eNeuro.
Thatte P, Tyagi A, Neelakantan A, Natesh M, Sen M, Thekaekara T.  2021.  Trends in Wildlife Connectivity Science from the Biodiverse and Human-Dominated South Asia. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE.
Srivathsa A, Rodrigues RG, Ben Toh K, Zachariah A, Taylor RW, Oli MK, Ramakrishnan U.  2021.  The truth about scats and dogs: Next-generation sequencing and spatial capture-recapture models offer opportunities for conservation monitoring of an endangered social canid. BIOLOGICAL CONSERVATION. (109028)
Raja SO, Sivaraman G, Biswas S, Singh G, Kalim F, Kandaswamy P, Gulyani A.  2021.  A Tunable Palette of Molecular Rotors Allows Multicolor, Ratiometric Fluorescence Imaging and Direct Mapping of Mitochondrial Heterogeneity.. ACS Appl Bio Mater. 4(5):4361-4372.
Thamm M, Wagler K, Brockmann A, Scheiner R.  2021.  Tyramine 1 Receptor Distribution in the Brain of Corbiculate Bees Points to a Conserved Function.. Brain Behav Evol. :1-13.
Kulkarni SS, Sabharwal V., Sheoran S., Basu A., Matsumoto K., Hisamoto N., Ghosh-Roy A., Koushika SP.  2021.  UNC-16 alters DLK-1 localization and negatively regulates actin and microtubule dynamics in Caenorhabditis elegans regenerating neurons. Genetics. 219(3):iyab139.
Lalwani DP, Gosavi S.  2021.  Understanding the Folding Mediated Assembly of the Bacteriophage MS2 Coat Protein Dimers.. J Phys Chem B.
Chatterjee KSankar, Das R.  2021.  An 'up' oriented methionine-aromatic structural motif in SUMO is critical for its stability and activity.. J Biol Chem. :100970.
Trivedi D.  2021.  Using CRISPR-Cas9-based genome engineering tools in Drosophila melanogaster.. Prog Mol Biol Transl Sci. 180:85-121.
Saltzberg DJ, Viswanath S, Echeverria I, Chemmama IE, Webb B, Sali A.  2021.  Using Integrative Modeling Platform to Compute, Validate, and Archive a Model of a Protein Complex Structure.. Protein Sci. 30(1):250-261.
Frigola J, Sabarinathan R, Gonzalez-Perez A, Lopez-Bigas N.  2021.  Variable interplay of UV-induced DNA damage and repair at transcription factor binding sites. Nucleic Acids Res. 49(2):891-901.
Surendra A, Osuri A.M, Ratnam J.  2021.  Varying impacts of logging frequency on tree communities and carbon storage across evergreen and deciduous tropical forests in the Andaman Islands, India. FOREST ECOLOGY AND MANAGEMENT. (118791)
Shirke PUday, Goswami H, Kumar V, Shah D, Beri S, Das S, Bellare J, Mayor S, Venkatesh KV, Seth JR et al..  2021.  "Viscotaxis"- Directed Migration of Mesenchymal Stem Cells in Response to Loss Modulus Gradient.. Acta Biomater.
Devereux HL, Twomey CR, Turner MS, Thutupalli S.  2021.  Whirligig beetles as corralled active Brownian particles.. J R Soc Interface. 18(177):20210114.
Deora T, Sane SS, Sane SP.  2021.  Wings and halteres act as coupled dual-oscillators in flies.. Elife. 10
2022
Lahree A, Baptista Sde Jesus S, Marques S, Perschin V, Zuzarte-Luís V, Goel M, Choudhary HHasan, Mishra S, Stigloher C, Zerial M et al..  2022.  Active APPL1 sequestration by Plasmodium favors liver-stage development.. Cell Rep. 39(9):110886.
Saha S, Das A, Patra C, Anilkumar AA, Sil P, Mayor S, Rao M.  2022.  Active emulsions in living cell membranes driven by contractile stresses and transbilayer coupling. Proc Natl Acad Sci U S A.. 119(30):e2123056119.
Natesan R, Gowrishankar K, Kuttippurathu L, Kumar PBSunil, Rao M.  2022.  Active Remodeling of Chromatin and Implications for Folding.. J Phys Chem B.
Bansal A, Das A, Rao M.  2022.  Active segregation dynamics in the living cell. INDIAN JOURNAL OF PHYSICS.
Barneda D, Janardan V, Niewczas I, Collins DM, Cosulich S, Clark J, Stephens LR, Hawkins PT.  2022.  Acyl chain selection couples the consumption and synthesis of phosphoinositides.. EMBO J. :e110038.
Panda A, Thakur R, Kumari A, Raghu P.  2022.  Analysis of Lipid Signaling in Drosophila Photoreceptors using Mass Spectrometry.. J Vis Exp. (181)
Jha RRaj, Isvaran K.  2022.  Antelope space-use and behavior indicate multilevel responses to varying anthropogenic influences in a highly human-dominated landscape.. Ecol Evol. 12(10):e9372.
Choudhury SDey, Dwivedi MKumar, Pippadpally S, Patnaik A, Mishra S, Padinjat R, Kumar V.  2022.  AP2 regulates Thickveins trafficking to attenuate NMJ growth signaling in .. eNeuro.
Kitnya N, Otis GW, Chakravorty J, Smith DR, Brockmann A.  2022.  Apis laboriosa confirmed by morphometric and genetic analyses of giant honey bees (Hymenoptera, Apidae) from sites of sympatry in Arunachal Pradesh, North East India. APIDOLOGIE. 53(4):47.
Kumar M, Singh A, Del Secco B, Baranov MV, van den Bogaart G, Sacanna S, Thutupalli S.  2022.  Assembling anisotropic colloids using curvature-mediated lipid sorting.. Soft Matter.
Krishnan A, Osuri AM.  2022.  Beyond the passive-active dichotomy: aligning research with the intervention continuum framework of ecological restoration. RESTORATION ECOLOGY .
Krishna S, Prasad R.  2022.  Building Indian Biomedical Leadership to Bridge the Gap Between Science, Primary Health Care and Public Health.. J Indian Inst Sci. :1-7.
Joshi S, Sawant D, Ogale H, Kunte K.  2022.  Burmagomphus chaukulensis, a new species of dragonfly (Odonata: Anisoptera: Gomphidae) from the Western Ghats, Maharashtra, India. ZOOTAXA . 5133(3):413-430.
Garcia-Font N, Mitchell-Heggs R, Saxena K, Gabbert C, Taylor G, Mastroberadino G, Spooner PA, Gobbo F, Dabrowska JK, Chattarji S et al..  2022.  Ca2+ imaging of self and other in medial prefrontal cortex during social dominance interactions in a tube test.. Proc Natl Acad Sci U S A. 119(31):e2107942119.
Bagchi B, Seal S, Raina M, Basu DNath, Khan I.  2022.  Carcass Scavenging Relaxes Chemical-Driven Female Interference Competition in Flour Beetles. AMERICAN NATURALIST.
Agashe D, Maheshwary S, Pattanaik JKumar, Prakash J, Bhatt P, Arya S.S, Chatterjee S, Kumar P, Singh P, Abbas N et al..  2022.  Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
Srivathsa A, Banerjee A, Banerjee S, Chawla MMathew, Das A, Ganguly D, Rodrigues RG, Adhya T, Bhatia S, Kshettry A et al..  2022.  Chasms in charismatic species research: Seventy years of carnivore science and its implications for conservation and policy in India. BIOLOGICAL CONSERVATION . 273(109694)
Anujan K, Ratnam J, Sankaran M.  2022.  Chronic browsing by an introduced mammalian herbivore in a tropical island alters species composition and functional traits of forest understory plant communities. BIOTROPICA .
Eriksson O, Bhalla USingh, Blackwell KT, Crook SM, Keller D, Kramer A, Linne M-L, Saudargienė A, Wade RC, Kotaleski JHellgren.  2022.  Combining hypothesis- and data-driven neuroscience modeling in FAIR workflows.. Elife. 11
Morin DJ, Boulanger J, Bischof R, Lee DC, Ngoprasert D, Fuller AK, McLellan B, Steinmetz R, Sharma S, Garshelis D et al..  2022.  Comparison of methods for estimating density and population trends for low-density Asian bears. GLOBAL ECOLOGY AND CONSERVATION. 35(e02058)
K Shafi M, Sowdhamini R.  2022.  Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members.. BMC Genomics. 23(1):516.
Bheemireddy S, Sandhya S, Srinivasan N, Sowdhamini R.  2022.  Computational tools to study RNA-protein complexes.. Front Mol Biosci. 9:954926.
Coetsee C., Wigley B.J, Sankaran M., Ratnam J., Augustine D.J.  2022.  Contrasting Effects of Grazing vs Browsing Herbivores Determine Changes in Soil Fertility in an East African Savanna. ECOSYSTEMS .
Prakash A, Agashe D, Khan I.  2022.  The costs and benefits of basal infection resistance vs immune priming responses in an insect.. Dev Comp Immunol. 126:104261.
Tirumalai V, Narjala A, Swetha C, G Sundar VHari, Sujith TN, Shivaprasad PV.  2022.  Cultivar-specific miRNA-mediated RNA silencing in grapes.. Planta. 256(1):17.
Sahasrabuddhe V, Ghosh HS.  2022.  Cx3Cr1-Cre induction leads to microglial activation and IFN-1 signaling caused by DNA damage in early postnatal brain.. Cell Rep. 38(3):110252.
Tanalgo KC, Tabora JAries G, de Oliveira HFernandes, Haelewaters D, Beranek CT, Otálora-Ardila A, Bernard E, Gonçalves F, Eriksson A, Donnelly M et al..  2022.  DarkCideS 1.0, a global database for bats in karsts and caves.. Sci Data. 9(1):155.
Dua N, Seshadri A, Badrinarayanan A.  2022.  DarT-mediated mtDNA damage induces dynamic reorganization and selective segregation of mitochondria.. J Cell Biol. 221(10)
Sarkar SR, Dubey VKumar, Jahagirdar A, Lakshmanan V, Haroon MMohamed, Sowndarya S, Sowdhamini R, Palakodeti D.  2022.  DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration.. Dev Biol.
Rajagopal D, Sopory SK, Mathew M.K.  2022.  Dealing with Environmental Fluctuations: Diversity of Potassium Uptake Systems Across the Three Domains of Life. JOURNAL OF PLANT GROWTH REGULATION .
Singh J, Raina R, Vinothkumar KR, Anand R.  2022.  Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.. ACS Chem Biol.
Singh M, Roychowdhury A, Gupta A.  2022.  Defects and metric anomalies in Foppl-von Karman surfaces. PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES. 478(2262):20210829.
Swetha C, Narjala A, Pandit A, Tirumalai V, Shivaprasad PV.  2022.  Degradome comparison between wild and cultivated rice identifies differential targeting by miRNAs.. BMC Genomics. 23(1):53.
Amarasinghe AAThasun, Ganesh S.R., Mirza ZA, Campbell PD, Pauwels OSG, Schweiger S, Kupfer A, Patel H, Karunarathna S, Deuti K et al..  2022.  The delusion of stripes: A century-old mystery of five-lined sun skinks (Reptilia: Scincidae: Eutropis) of Peninsular India elucidated. Zoologischer Anzeiger. 296:71-90.
Owen CL, Marshall DC, Wade EJ, Meister R, Goemans G, Kunte K, Moulds M, Hill K, Villet M, Pham T-H et al..  2022.  Detecting and removing sample contamination in phylogenomic data: an example and its implications for Cicadidae phylogeny (Insecta: Hemiptera).. Syst Biol.
Uddin A, Malla JA, Kumar H, Kumari M, Sinha S, Sharma VK, Kumar Y, Talukdar P, Lahiri M, Maiti TK et al..  2022.  Development of a Systematic Strategy toward Promotion of α-Synuclein Aggregation Using 2-Hydroxyisophthalamide-Based Systems. . Biochemistry.
Mondal S, K Shafi M, Raizada A, Song H, Badigannavar AM, Sowdhamini R.  2022.  Development of candidate gene-based markers and map-based cloning of a dominant rust resistance gene in cultivated groundnut (Arachis hypogaea L.).. Gene. 827:146474.
Singh A, Thakur NL, Sheikh F.  2022.  Differential tolerance capacity of intertidal organisms (sponge and zoanthid) to the environmental stresses: Preliminary Bndings from a rockpool transplantation experiment. JOURNAL OF EARTH SYSTEM SCIENCE. 131(1)
Bhattacharjee R, Udgaonkar JB.  2022.  Differentiating between the sequence of structural events on alternative pathways of folding of a heterodimeric protein.. Protein Sci. :e4513.
Prakash DL, Gosavi S.  2022.  The diversity of protein-protein interaction interfaces within T=3 icosahedral viral capsids. Front Mol Biosci. . 9:967877
Pulipati S, Somasundaram S, Rana N, Kumaresan K, Shafi M, Civan P, Sellamuthu G, Jaganathan D, Ramaravi PVenkatesan, Punitha S. et al..  2022.  Diversity of Sodium Transporter HKT1;5 in Genus Oryza. RICE SCIENCE. 29(1):31-46.
Prasad M, Kataria P, Ningaraju S, Buddidathi R, Bankapalli K, Swetha C, Susarla G, Venkatesan R, D'Silva P, Shivaprasad PV.  2022.  Double DJ-1 domain containing Arabidopsis DJ-1D is a robust macromolecule deglycase.. New Phytol.
Joshi AG, Praveen P, Ramakrishnan U, Sowdhamini R.  2022.  Draft genome sequence of an invasive plant .. Bioinformation. 18(9):739-741.
Trisal S, Aranha M, Chodankar A, VijayRaghavan K, Ramaswami M.  2022.  A DROSOPHILA CIRCUIT FOR HABITUATION OVERRIDE.. J Neurosci.
Kalmankar NV, Pavalam M, Indrakumar S, Srinivasan N, Sowdhamini R.  2022.  DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins.. Database (Oxford). 2022
Naik D, R. Rao SPrasad, Kunte K, Mustak MS.  2022.  Ecological monitoring and indicator taxa: butterfly communities in heterogeneous landscapes of the Western Ghats and Malabar coast, India. JOURNAL OF INSECT CONSERVATION.
Rebehmed J, de Brevern AG, Sowdhamini R, Joseph APraveen.  2022.  Editorial: Advances in Molecular Docking and Structure-Based Modelling.. Front Mol Biosci. 9:839826.
Nataraj N, Hussain M, Ibrahim M, Hausmann AE, Rao S, Kaur S, Khazir J, Mir BAhmad, Olsson SB.  2022.  Effect of Altitude on Volatile Organic and Phenolic Compounds of Artemisia brevifolia Wall ex Dc. From the Western Himalayas. FRONTIERS IN ECOLOGY AND EVOLUTION. 10(864728)

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