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2018
Najar AH, Sneha KM, Ashok A, Babu S, Subramaniam AG, Kannan R, Viswanath B, Purushottam M, Varghese M, Parvez S et al..  2018.  Derivation of iPSC lines from two patients with familial Alzheimer's disease from India.. Stem Cell Res. 34:101370.
Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..  2018.  Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Nandkishore N, Vyas B, Javali A, Ghosh S, Sambasivan R.  2018.  Divergent early mesoderm specification underlies distinct head and trunk muscle programmes in vertebrates.. Development. 145(18)
Neelamraju S, Gosavi S, Wales DJ.  2018.  Energy Landscape of the Designed Protein Top7.. J Phys Chem B.
Panda A, Thakur R, Krishnan H, Naik A, Shinde D, Raghu P.  2018.  Functional analysis of mammalian phospholipase D enzymes.. Biosci Rep.
Ashwini N, Sajeevan RSivarajan, Udayakumar M, Nataraja KN.  2018.  Identification of splice variant of in ssp. genotypes under salinity stress.. 3 Biotech. 8(8):345.
Nair D, Krishna JGopala, Panikkar MVelayudhan, Nair BGopalakris, Pai JGopalakris, Nair SSadasivan.  2018.  Identification, purification, biochemical and mass spectrometric characterization of novel phycobiliproteins from a marine red alga, Centroceras clavulatum.. Int J Biol Macromol.
Nair D, Krishna JGopala, Panikkar MVelayudhan, Nair BGopalakris, Pai JGopalakris, Nair SSadasivan.  2018.  Identification, purification, biochemical and mass spectrometric characterization of novel phycobiliproteins from a marine red alga, Centroceras clavulatum.. Int J Biol Macromol.
Nair D, Krishna JGopala, Panikkar MVelayudhan, Nair BGopalakris, Pai JGopalakris, Nair SSadasivan.  2018.  Identification, purification, biochemical and mass spectrometric characterization of novel phycobiliproteins from a marine red alga, Centroceras clavulatum.. Int J Biol Macromol.
Swetha C, Basu D, Pachamuthu K, Tirumalai V, Nair A, Prasad M, Shivaprasad PV.  2018.  Major domestication-related phenotypes in indica rice are due to loss of miRNA-mediated laccase silencing.. Plant Cell.
Saxena N, Natesan D, Sane SP.  2018.  Odor source localization in complex visual environments by fruit flies.. J Exp Biol. 221(Pt 2)
Nair J, Sanmugam PV, Karpe SD, Ramakrishnan U, Olsson SB.  2018.  An optimized protocol for large-scale in situ sampling and analysis of volatile organic compounds. Ecology and Evolution. 8(11):59242-5935.
Nair J, Pragadheesh VS, Karpe SD, Ramakrishnan U, Olsson SB.  2018.  An optimized protocol for large‐scale in situ sampling and analysis of volatile organic compounds . Ecology and Evolution. 8(11):5924-5936.
Nandi SKumar, Mandal R, Bhuyan PJyoti, Dasgupta C, Rao M, Gov NS.  2018.  A random first-order transition theory for an active glass.. Proc Natl Acad Sci U S A. 115(30):7688-7693.
Saha P, Nandi AK, Unnikrishnan S, Shilpa MC, Shukla SP, Mandal S, Mitra A, Gadagkar R.  2018.  A Route to Direct Fitness: Natural and Experimentally Induced Queen Succession in the Tropical Primitively Eusocial Wasp Ropalidia marginata . JOURNAL OF INSECT BEHAVIOR . 31(1):54-65.
Bauer G, Fakhri N, Kicheva A, Kondev J, Kruse K, Noji H, Riveline D, Saunders TE, Thattai M, Wieschaus E.  2018.  The Science of Living Matter for Tomorrow.. Cell Syst. 6(4):400-402.
Kendroud S, Bohra AA, Kuert PA, Nguyen B, Guillermin O, Sprecher SG, Reichert H, VijayRaghavan K, Hartenstein V.  2018.  Structure and development of the subesophageal zone of the Drosophila brain. II. Sensory compartments.. J Comp Neurol. 526(1):33-58.
Yapo C, Nair AG, Kotaleski JHellgren, Vincent P, Castro LRV.  2018.  Switch-like PKA responses in the nucleus of striatal neurons.. J Cell Sci.
2017
Swaminathan V, Kalappurakkal JMathew, Mehta SB, Nordenfelt P, Moore TI, Koga N, Baker DA, Oldenbourg R, Tani T, Mayor S et al..  2017.  Actin retrograde flow actively aligns and orients ligand-engaged integrins in focal adhesions.. Proc Natl Acad Sci U S A. 114(40):10648-10653.
Nandwani N, Surana P, Udgaonkar JB, Das R, Gosavi S.  2017.  Amino-acid composition after loop deletion drives domain swapping.. Protein Sci. 26(10)
Griffith DM, Lehmann CER, Strömberg CAE, Parr CL, R Pennington T, Sankaran M, Ratnam J, Still CJ, Powell RL, Hanan NP et al..  2017.  Comment on "The extent of forest in dryland biomes".. Science. 358(6365)
Natesh M, Atla G, Nigam P, Jhala YV, Zachariah A, Borthakur U, Ramakrishnan U.  2017.  Conservation priorities for endangered Indian tigers through a genomic lens.. Sci Rep. 7(1):9614.
Natesh M, Atla G, Nigam P, Jhala YV, Zachariah A, Borthakur U, Ramakrishnan U.  2017.  Conservation priorities for endangered Indian tigers through a genomic lens.. Sci Rep. 7(1):9614.
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A et al..  2017.  Cytoplasmic poly (A) binding protein (PABPC2) critically regulates epidermal maintenance and turnover in planarian Schmidtea mediterranea.. Development.
Hudson LN, Newbold T, Contu S, Hill SLL, Kumar A.  2017.  The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project. Ecology and Evolution. 7(1):145-188.
Mukherjee S, Dohno C, Nakatani K.  2017.  Design and Synthesis of Cyclic Mismatch-Binding Ligands (CMBLs) with Variable Linkers by Ring-Closing Metathesis and their Photophysical and DNA Repeat Binding Properties.. Chemistry. 23(47):11385-11396.
Yapo C, Nair AG, Clement L, Castro LR, Kotaleski JHellgren, Vincent P.  2017.  Detection of phasic dopamine by D1 and D2 striatal medium spiny neurons.. J Physiol.
Nordenfelt P, Moore TI, Mehta SB, Kalappurakkal JMathew, Swaminathan V, Koga N, Lambert TJ, Baker D, Waters JC, Oldenbourg R et al..  2017.  Direction of actin flow dictates integrin LFA-1 orientation during leukocyte migration.. Nat Commun. 8(1):2047.
Narayan A, Campos LA, Bhatia S, Fushman D, Naganathan AN.  2017.  Graded Structural Polymorphism in a Bacterial Thermosensor Protein.. J Am Chem Soc. 139(2):792-802.
Narayan A, Campos LA, Bhatia S, Fushman D, Naganathan AN.  2017.  Graded Structural Polymorphism in a Bacterial Thermosensor Protein.. J Am Chem Soc. 139(2):792-802.
Nordström K, Dahlbom J, Pragadheesh VS, Ghosh S, Olsson A, Dyakova O, Suresh SKrishna, Olsson SB.  2017.  In situ modeling of multimodal floral cues attracting wild pollinators across environments.. Proc Natl Acad Sci U S A.
Barnosky AD, Hadly EA, Gonzalez P, Head J, P Polly D, A Lawing M, Eronen JT, Ackerly DD, Alex K, Biber E et al..  2017.  Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems.. Science. 355(6325)
Nilofer C, Sukhwal A, Mohanapriya A, Kangueane P.  2017.  Protein-protein interfaces are vdW dominant with selective H-bonds and (or) electrostatics towards broad functional specificity.. Bioinformation. 13(6):164-173.
Sundaramurthy V, Korf H, Singla A, Scherr N, Nguyen L, Ferrari G, Landmann R, Huygen K, Pieters J.  2017.  Survival of Mycobacterium tuberculosis and Mycobacterium bovis BCG in lysosomes in vivo.. Microbes Infect. 19(11):515-526.
Neelamraju S, Oligschleger C, J Schön C.  2017.  The threshold algorithm: Description of the methodology and new developments.. J Chem Phys. 147(15):152713.
Choudhary B, Kamak M, Ratnakaran N, Kumar J, Awasthi A, Li C, Nguyen K, Matsumoto K, Hisamoto N, Koushika SP.  2017.  UNC-16/JIP3 regulates early events in synaptic vesicle protein trafficking via LRK-1/LRRK2 and AP complexes.. PLoS Genet. 13(11):e1007100.
2016
Sturm S, Ramesh D, Brockmann A, Neupert S, Predel R.  2016.  Agatoxin-like peptides in the neuroendocrine system of the honey bee and other insects.. J Proteomics. 132:77-84.
Dhanyalakshmi KH, Naika MBN, Sajeevan RS, Mathew OK, K Shafi M, Sowdhamini R, Nataraja KN.  2016.  An Approach to Function Annotation for Proteins of Unknown Function (PUFs) in the Transcriptome of Indian Mulberry.. PLoS One. 11(3):e0151323.
Dhanyalakshmi KH, Naika MBN, Sajeevan RS, Mathew OK, K Shafi M, Sowdhamini R, Nataraja KN.  2016.  An Approach to Function Annotation for Proteins of Unknown Function (PUFs) in the Transcriptome of Indian Mulberry.. PLoS One. 11(3):e0151323.
Osuri AM, Ratnam J, Varma V, Alvarez-Loayza P, Astaiza JHurtado, Bradford M, Fletcher C, Ndoundou-Hockemba M, Jansen PA, Kenfack D et al..  2016.  Contrasting effects of defaunation on aboveground carbon storage across the global tropics.. Nat Commun. 7:11351.
Rana D, Leena M, Nithyananth M, Pasricha R, Manivasagam G, Ramalingam M.  2016.  Control of Stem Cell Fate and Function by Polymer Nanofibers. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY. 16(9):9015-9021.
Nussinov R, Udgaonkar JB.  2016.  Editorial overview: Folding and binding: Dynamic conformational heterogeneity is pivotal to cell life.. Curr Opin Struct Biol. 36:iv-vi.
Nayak G, Honguntikar SD, Kalthur SGuruprasad, D'Souza ASylvan, Mutalik S, Setty MM, Kalyankumar R, Krishnamurthy H, Kalthur G, Adiga SKumar.  2016.  Ethanolic extract of Moringa oleifera Lam. leaves protect the pre-pubertal spermatogonial cells from cyclophosphamide-induced damage.. J Ethnopharmacol. 182:101-9.
Nair A, Agashe D.  2016.  Host-specific, spatial and temporal variation in culturable gut bacterial communities of dragonflies. Current Science. 110(8):1513-1523.
Fox SJohn, Li J, Tan YSing, Nguyen MN, Pal A, Ouaray Z, Yadahalli S, Kannan S.  2016.  The Multifaceted Roles of Molecular Dynamics Simulations in Drug Discovery.. Curr Pharm Des. 22(23):3585-600.
Ghodke PP, Gore KR, Harikrishna S, Samanta B, Kottur J, Nair DT, Pradeepkumar PI.  2016.  The N(2)-Furfuryl-deoxyguanosine Adduct Does Not Alter the Structure of B-DNA.. J Org Chem. 81(2):502-11.
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Bhatia D, Arumugam S, Nasilowski M, Joshi H, Wunder C, Chambon V, Prakash V, Grazon C, Nadal B, Maiti PK et al..  2016.  Quantum dot-loaded monofunctionalized DNA icosahedra for single-particle tracking of endocytic pathways.. Nat Nanotechnol.
Bhatia D, Arumugam S, Nasilowski M, Joshi H, Wunder C, Chambon V, Prakash V, Grazon C, Nadal B, Maiti PK et al..  2016.  Quantum dot-loaded monofunctionalized DNA icosahedra for single-particle tracking of endocytic pathways.. Nat Nanotechnol.
Kaushik S, Nair AG, Mutt E, Subramanian HPrasanna, Sowdhamini R.  2016.  Rapid and enhanced remote homology detection by cascading hidden Markov model searches in sequence space.. Bioinformatics. 32(3):338-44.
Kottur J, Nair DT.  2016.  Reactive Oxygen Species Play an Important Role in the Bactericidal Activity of Quinolone Antibiotics.. Angew Chem Int Ed Engl. 55(7):2397-400.
Nair AG, Bhalla US, Kotaleski JHellgren.  2016.  Role of DARPP-32 and ARPP-21 in the Emergence of Temporal Constraints on Striatal Calcium and Dopamine Integration.. PLoS Comput Biol. 12(9):e1005080.
Nayak DD, Agashe D, Lee M-C, Marx CJ.  2016.  Selection Maintains Apparently Degenerate Metabolic Pathways due to Tradeoffs in Using Methylamine for Carbon versus Nitrogen.. Curr Biol. 26(11):1416-26.
Parida SK, Kalia S, Pandit A, Nayak P, Singh RKushal, Gaikwad K, Srivastava PShankar, Singh NK, Mohapatra T.  2016.  Single nucleotide polymorphism in sugar pathway and disease resistance genes in sugarcane.. Plant Cell Rep. 35(8):1629-53.
Barah P, N MNaika B, Jayavelu NDoni, Sowdhamini R, Shameer K, Bones AM.  2016.  Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses.. Nucleic Acids Res. 44(7):3147-64.
2015
Mak S-S, Alev C, Nagai H, Wrabel A, Matsuoka Y, Honda A, Sheng G, Ladher RK.  2015.  Characterization of the finch embryo supports evolutionary conservation of the naive stage of development in amniotes.. Elife. 4:e07178.
Babbitt PC, Bagos PG, Bairoch A, Bateman A, Chatonnet A, Chen MJinan, Craik DJ, Finn RD, Gloriam D, Haft DH et al..  2015.  Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.. Database (Oxford). 2015:bav063.
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.. PLoS Genet. 11(1):e1004948.
Marthews T.R, Nelaballi S., Ratnam J., Sankaran M..  2015.  Ecosystem monitoring and forest census studies in South Asia (Meeting Report). Current Science. 180:1779–1782.
Sudha G, Naveenkumar N, Srinivasan N.  2015.  Evolutionary and structural analyses of heterodimeric proteins composed of subunits with same fold.. Proteins. 83(10):1766-86.
Banerjee A, Grazon C, Nadal B, Pons T, Krishnan Y, Dubertret B.  2015.  Fast, Efficient, and Stable Conjugation of Multiple DNA Strands on Colloidal Quantum Dots.. Bioconjug Chem. 26(8):1582-9.
Weinert T, Olieric V, Waltersperger S, Panepucci E, Chen L, Zhang H, Zhou D, Rose J, Ebihara A, Kuramitsu S et al..  2015.  Fast native-SAD phasing for routine macromolecular structure determination.. Nat Methods. 12(2):131-3.
Upadhyay AK, Chacko AR, Gandhimathi A, Ghosh P, Harini K, Joseph AP, Joshi AG, Karpe SD, Kaushik S, Kuravadi N et al..  2015.  Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties.. BMC Plant Biol. 15:212.
Upadhyay AK, Chacko AR, Gandhimathi A, Ghosh P, Harini K, Joseph AP, Joshi AG, Karpe SD, Kaushik S, Kuravadi N et al..  2015.  Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties.. BMC Plant Biol. 15:212.
Holliday GL, Bairoch A, Bagos PG, Chatonnet A, Craik DJ, Finn RD, Henrissat B, Landsman D, Manning G, Nagano N et al..  2015.  Key challenges for the creation and maintenance of specialist protein resources.. Proteins. 83(6):1005-13.
Gupte TM, Haque F, Gangadharan B, Sunitha MS, Mukherjee S, Anandhan S, Rani DSelvi, Mukundan N, Jambekar A, Thangaraj K et al..  2015.  Mechanistic heterogeneity in contractile properties of α-tropomyosin (TPM1) mutants associated with inherited cardiomyopathies.. J Biol Chem. 290(11):7003-15.
Naik S, MacFarlane M, Sarin A.  2015.  Notch4 Signaling Confers Susceptibility to TRAIL-Induced Apoptosis in Breast Cancer Cells.. J Cell Biochem. 116(7):1371-80.
Kosmalska AJoanna, Casares L, Elosegui-Artola A, Thottacherry JJose, Moreno-Vicente R, González-Tarragó V, del Pozo MÁngel, Mayor S, Arroyo M, Navajas D et al..  2015.  Physical principles of membrane remodelling during cell mechanoadaptation.. Nat Commun. 6:7292.
Baral A, Irani NG, Fujimoto M, Nakano A, Mayor S, Mathew MK.  2015.  Salt-induced remodeling of spatially restricted clathrin-independent endocytic pathways in Arabidopsis root.. Plant Cell. 27(4):1297-315.
Shrivastava R, Köster D, Kalme S, Mayor S, Neerathilingam M.  2015.  Tailor-made ezrin actin binding domain to probe its interaction with actin in-vitro.. PLoS One. 10(4):e0123428.
Kottur J, Sharma A, Gore KR, Narayanan N, Samanta B, Pradeepkumar PI, Nair DT.  2015.  Unique structural features in DNA polymerase IV enable efficient bypass of the N2 adduct induced by the nitrofurazone antibiotic.. Structure. 23(1):56-67.
Kottur J, Sharma A, Gore KR, Narayanan N, Samanta B, Pradeepkumar PI, Nair DT.  2015.  Unique structural features in DNA polymerase IV enable efficient bypass of the N2 adduct induced by the nitrofurazone antibiotic.. Structure. 23(1):56-67.
Mak S-S, Wrabel A, Nagai H, Ladher RK, Sheng G.  2015.  Zebra finch as a developmental model.. Genesis. 53(11):669-77.

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