Z
Zhang C, Joseph AMary, Casini L, Collier J, Badrinarayanan A, Manley S.
2024. Chromosome organization shapes replisome dynamics in Caulobacter crescentus.. Nat Commun. 15(1):3460.
Zambre AM, Arthur R.
2018. Foraging plasticity in obligate corallivorous Melon butterflyfish across three recently bleached reefs . ETHOLOGY. 124 (5):302-310.
Zaarour RFaouzi, Sharda M, Azakir B, Venkatesh GHassan, Khouzam RAbou, Rifath A, Nizami ZNausheen, Abdullah F, Mohammad F, Karaali H et al..
2022. Genomic Analysis of Waterpipe Smoke-Induced Lung Tumor Autophagy and Plasticity.. Int J Mol Sci. 23(12)
Y
Yousuf M, Iuliani I, Veetil RT, Seshasayee ASai Narain, Sclavi B, Lagomarsino MCosentino.
2020. Early fate of exogenous promoters in E. coli.. Nucleic Acids Res.
Young A.M., Kohl P.L., Rutschmann B., teffen-Dewenter I, Brockmann A.
2021. Temporal and spatial foraging patterns of three Asian honey bee species in Bangalore, India. Apidologie .
Young AM, Kodabalagi S, Brockmann A, Dyer FC.
2021. A hard day's night: Patterns in the diurnal and nocturnal foraging behavior of Apis dorsata across lunar cycles and seasons.. PLoS One. 16(10):e0258604.
Young A.M., Brockmann A, Dyer F.C..
2021. Adaptive tuning of the exploitation-exploration trade-off in four honey bee species. Behavioral Ecology and Sociobiology. 75(20)
Yasmin F, Saxena K, McEwen BS, Chattarji S.
2016. The delayed strengthening of synaptic connectivity in the amygdala depends on NMDA receptor activation during acute stress.. Physiol Rep. 4(20)
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN et al..
2020. Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655.
Yapo C, Nair AG, Clement L, Castro LR, Kotaleski JHellgren, Vincent P.
2017. Detection of phasic dopamine by D1 and D2 striatal medium spiny neurons.. J Physiol.
Yapo C, Nair AG, Kotaleski JHellgren, Vincent P, Castro LRV.
2018. Switch-like PKA responses in the nucleus of striatal neurons.. J Cell Sci.
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.
2019. Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Yang X, Heinemann M, Howard J, Huber G, Iyer-Biswas S, Le Treut G, Lynch M, Montooth KL, Needleman DJ, Pigolotti S et al..
2021. Physical bioenergetics: Energy fluxes, budgets, and constraints in cells.. Proc Natl Acad Sci U S A. 118(26)
Yan X, Kohli M, Wen Y, Wang X.
2023. Nitrogen addition and warming modulate the pathogen impact on plant biomass by shifting intraspecific functional traits and reducing species richness. JOURNAL OF ECOLOGY . 111(2):509-524.
Yamamoto J, Adachi K, Bower JR, Matsui H, Nakaya M, Ohtani R, Puneeta P, Suzuki S, Tokioka S, Vijai D et al..
2019. Close-up observations on the spawning behavior of a captive Japanese flying squid (Todarodes pacificus).. Sci Rep. 9(1):19739.
Yadav S, Vinothkumar KR.
2024. Factors affecting macromolecule orientations in thin films formed in cryo-EM.. Acta Crystallogr D Struct Biol. 80(Pt 7):535-550.
Yadav A, Vagne Q, Sens P, Iyengar G, Rao M.
2022. Glycan processing in the Golgi: optimal information coding and constraints on cisternal number and enzyme specificity.. Elife. 11
Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S, Raghu P.
2015. RDGBα, a PtdIns-PtdOH transfer protein, regulates G-protein-coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction.. J Cell Sci. 128(17):3330-44.
Yadav S, Rathod P, Alcoverro T, Arthur R.
2016. Choice and destiny: the substrate composition and mechanical stability of settlement structures can mediate coral recruit fate in post-bleached reefs. Coral Reefs. 35(1):211-222.
Yadav S, Thakur R, Georgiev P, Deivasigamani S, Krishnan H, Ratnaparkhi G, Raghu P.
2018. RDGBα localization and function at membrane contact sites is regulated by FFAT-VAP interactions.. J Cell Sci. 131(1)
Yadav S, Cockcroft S, Raghu P.
2016. The Drosophila photoreceptor as a model system for studying signalling at membrane contact sites.. Biochem Soc Trans. 44(2):447-51.
Yadahalli S, Li J, Lane DP, Gosavi S, Verma CS.
2017. Characterizing the conformational landscape of MDM2-binding p53 peptides using Molecular Dynamics simulations.. Sci Rep. 7(1):15600.
Yadahalli S, Gosavi S.
2017. Packing energetics determine the folding routes of the RNase-H proteins.. Phys Chem Chem Phys.
Yadahalli S, Jayanthi LP, Gosavi S.
2022. A Method for Assessing the Robustness of Protein Structures by Randomizing Packing Interactions.. Front Mol Biosci. 9:849272.
Yadahalli S, Gosavi S.
2016. Functionally Relevant Specific Packing Can Determine Protein Folding Routes.. J Mol Biol. 428(2 Pt B):509-21.
W
Wyart C, Thirumalai V.
2019. Building behaviors, one layer at a time.. Elife. 8
Wortel MT, Agashe D, Bailey SF, Bank C, Bisschop K, Blankers T, Cairns J, Colizzi ESandro, Cusseddu D, Desai MM et al..
2023. Towards evolutionary predictions: Current promises and challenges.. Evol Appl. 16(1):3-21.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.
2017. Bats in the Ghats: Agricultural intensification reduces functional diversity and increases trait filtering in a biodiversity hotspot in India. Biological Conservation. 210:48-55.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.
2015. Landscape scale habitat suitability modelling of bats in the Western Ghats of India: Bats like something in their tea. Biological Conservation. 191:529–536.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.
2018. Heard but not seen: Comparing bat assemblages and study methods in a mosaic landscape in the Western Ghats of India.. Ecol Evol. 8(8):3883-3894.
Woltering JM, Irisarri I, Ericsson R, Joss JMP, Sordino P, Meyer A.
2020. Sarcopterygian fin ontogeny elucidates the origin of hands with digits.. Sci Adv. 6(34):eabc3510.
Winata CLanny, Kondrychyn I, Korzh V.
2015. Changing Faces of Transcriptional Regulation Reflected by Zic3.. Curr Genomics. 16(2):117-27.
Wills C, Wang B, Fang S, Wang Y, Jin Y, Lutz J, Thompson J, Harms KE, Pulla S, Pasion B et al..
2021. Interactions between all pairs of neighboring trees in 16 forests worldwide reveal details of unique ecological processes in each forest, and provide windows into their evolutionary histories.. PLoS Comput Biol. 17(4):e1008853.
Willemen L, Barger NN, Brink Bten, Cantele M, Erasmus BFN, Fisher JL, Gardner T, Holland TG, Kohler F, Kotiaho JS et al..
2020. How to halt the global decline of lands. NATURE SUSTAINABILITY.
Willaert B, Suyesh R, Garg S, Giri VB, Bee MA, Biju SD.
2016. A unique mating strategy without physical contact during fertilization in Bombay Night Frogs (Nyctibatrachus humayuni) with the description of a new form of amplexus and female call.. PeerJ. 4:e2117.
Wigley BJ, Fritz H, Coetsee C.
2018. Defence strategies in African savanna trees.. Oecologia.
Wigley BJ, Coetsee C, Kruger LM, Ratnam J, Sankaran M.
2019. Ants, fire, and bark traits affect how African savanna trees recover following damage. BIOTROPICA.
Wigley BJ, Augustine DJ, Coetsee C, Ratnam J, Sankaran M.
2020. Grasses continue to trump trees at soil carbon sequestration following herbivore exclusion in a semi-arid African savanna.. Ecology. :e03008.
Wigley BJ, Staver C, Zytkowiak R, Jagodzinski AM, Wigley-Coetsee C.
2019. Root trait variation in African savannas. Plant and Soil. 441(1-2):555–565.
Wigley BJ, Slingsby JA, Diaz S, Bond WJ, Fritz H, Coetsee C.
2016. Leaf traits of African woody savanna species across climate and soil fertility gradients: evidence for conservative versus acquisitive resource-use strategies. Journal of Ecology.
Wigley BJ, Coetsee C, Augustine DJ, Ratnam J, Hattas D, Sankaran M..
2019. A thorny issue: Woody plant defence and growth in an East African savanna. JOURNAL OF ECOLOGY. 107(4):1839-1851.
Wickramasinghe N, Robin VV, Ramakrishnan U, Reddy S, Seneviratne SS.
2017. Non-sister Sri Lankan white-eyes (genus Zosterops) are a result of independent colonizations.. PLoS One. 12(8):e0181441.
Werner S, Okenve-Ramos P, Hehlert P, Zitouni S, Priya P, Mendonça S, Sporbert A, Spalthoff C, Göpfert MC, Jana SChandra et al..
2024. IFT88 maintains sensory function by localising signalling proteins along cilia.. Life Sci Alliance. 7(5)
Weinert T, Olieric V, Waltersperger S, Panepucci E, Chen L, Zhang H, Zhou D, Rose J, Ebihara A, Kuramitsu S et al..
2015. Fast native-SAD phasing for routine macromolecular structure determination.. Nat Methods. 12(2):131-3.
Wegener C, Hasan G.
2019. ER-Ca2+ sensor STIM regulates neuropeptides required for development under nutrient restriction in Drosophila.. PLoS One. 14(7):e0219719.
Warrit N, Ascher J, Basu P, Belavadi V, Brockmann A, al et.
2023. Opportunities and challenges in Asian bee research and conservation. BIOLOGICAL CONSERVATION . 285:110173.
Wang Z, Da W, Negi CSingh, Ghimire PLal, Wangdi K, Yadav PK, Pubu Z, Lama L, Yarpel K, Maunsell SC et al..
2022. Profiling, monitoring and conserving caterpillar fungus in the Himalayan region using anchored hybrid enrichment markers.. Proc Biol Sci. 289(1973):20212650.
Wang ET, J Taliaferro M, Lee J-A, Sudhakaran IP, Rossoll W, Gross C, Moss KR, Bassell GJ.
2016. Dysregulation of mRNA Localization and Translation in Genetic Disease.. J Neurosci. 36(45):11418-11426.
Wang T, Goyal A, Dubinkina V, Maslov S.
2019. Evidence for a multi-level trophic organization of the human gut microbiome.. PLoS Comput Biol. 15(12):e1007524.
Walavalkar K, Notani D.
2020. Beyond the coding genome: non-coding mutations and cancer.. Front Biosci (Landmark Ed). 25:1828-1838.
Walavalkar K, Saravanan B, Singh AKumar, Jayani RSingh, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV et al..
2020. A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer.. Nat Commun. 11(1):3598.
V
Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..
2018. Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Viswanath B, Jose SP, Squassina A, Thirthalli J, Purushottam M, Mukherjee O, Vladimirov V, Patrinos GP, Del Zompo M, Jain S.
2015. Cellular models to study bipolar disorder: A systematic review.. J Affect Disord. 184:36-50.
Viswan NA, HarshaRani GVani, Stefan MI, Bhalla US.
2018. FindSim: A Framework for Integrating Neuronal Data and Signaling Models.. Front Neuroinform. 12:38.
Viswan NAnn, Bhalla USingh.
2023. Understanding molecular signaling cascades in neural disease using multi-resolution models.. Curr Opin Neurobiol. 83:102808.
Vishwanath S, Sukhwal A, Sowdhamini R, Srinivasan N.
2017. Specificity and stability of transient protein-protein interactions.. Curr Opin Struct Biol. 44:77-86.
Vishen ASingh, Prost J, Rao M.
2019. Breakdown of effective temperature, power law interactions, and self-propulsion in a momentum-conserving active fluid.. Phys Rev E. 100(6-1):062602.
Vishen ASingh, Rupprecht J-F, Shivashankar GV, Prost J, Rao M.
2018. Soft inclusion in a confined fluctuating active gel.. Phys Rev E. 97(3-1):032602.
Viraktamath CA, Yeshwanth HM.
2023. Leafhopper subfamily Hylicinae (Hemiptera: Auchenorrhyncha: Cicadellidae) in the Indian subcontinent with description of new species.. Zootaxa. 5319(4):451-500.
Vinothkumar KR, Arya C, Ramanathan G, Subramanian R.
2020. Comparison of CryoEM and X-ray structures of dimethylformamidase.. Prog Biophys Mol Biol.
Vinothkumar KR.
2021. Expanding capabilities and infrastructure for cryo-EM.. Nat Methods. 18(5):437-438.
Vinothkumar KR.
2023. Structural heterogeneity of the Rieske iron-sulfur protein in a yeast complex III.. IUCrJ. 10(Pt 1):1-3.
Vinekar RS, Sowdhamini R.
2016. Three-dimensional modelling of the voltage-gated sodium ion channel from Anopheles gambiae reveals spatial clustering of evolutionarily conserved acidic residues at the extracellular sites.. Curr Neuropharmacol.
Vilizzi L, Copp GH, Hill JE, Adamovich B, Aislabie L, Akin D, Al-Faisal AJ, Almeida D, Azmai MNAmal, Bakiu R et al..
2021. A global-scale screening of non-native aquatic organisms to identify potentially invasive species under current and future climate conditions.. Sci Total Environ. 788:147868.
Vijayasarathy M, Balaram P.
2019. Cone snail prolyl-4-hydroxylase α-subunit sequences derived from transcriptomic data and mass spectrometric analysis of variable proline hydroxylation in C. amadis venom.. J Proteomics. 194:37-48.
Vijayasarathy M, Kumar S, Das R, Balaram P.
2023. Cysteine-free cone snail venom peptides: Classification of precursor proteins and identification of mature peptides.. J Pept Sci. :e3554.
Vijayasarathy M, Kumar S, Venkatesha MA, Balaram P.
2023. Contryphan sequence diversity: Messy N-terminus processing, effects on chromatographic behaviour and mass spectrometric fragmentation.. J Proteomics. :104805.
Vijayasarathy M, Balaram P.
2018. Mass spectrometric identification of bromotryptophan containing conotoxin sequences from the venom of C. amadis.. Toxicon. 144:68-74.
Vijayasarathy M, Basheer SM, Balaram P.
2018. Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins.. J Proteome Res. 17(8):2695-2703.
Vijayaraghavareddy P, Akula NN, Vemanna RS, Math RGH, Shinde DD, Yin X, Struik PC, Makarla U, Sreeman S.
2021. Metabolome profiling reveals impact of water limitation on grain filling in contrasting rice genotypes.. Plant Physiol Biochem. 162:690-698.
Vijayakrishnan S, Kumar MAnanda, Umapathy G, Kumar V, Sinha A.
2018. Physiological stress responses in wild Asian elephants Elephas maximus in a human-dominated landscape in the Western Ghats, southern India.. Gen Comp Endocrinol. 266:150-156.
Verma S, Reddy P, Sowdhamini R.
2023. Integrated approaches for the recognition of small molecule inhibitors for Toll-like receptor 4.. Comput Struct Biotechnol J. 21:3680-3689.
Verma S, Sowdhamini R.
2022. A genome-wide search of Toll/Interleukin-1 receptor (TIR) domain-containing adapter molecule (TICAM) and their evolutionary divergence from other TIR domain containing proteins.. Biol Direct. 17(1):24.
Verma S, Menon R, Sowdhamini R.
2024. Structural insights into the role of deleterious mutations at the dimeric interface of Toll-like receptor interferon-β related adaptor protein.. Proteins.
Venugopal N, Ghosh A, Gala H, Aloysius A, Vyas N, Dhawan J.
2020. The primary cilium dampens proliferative signaling and represses a G2/M transcriptional network in quiescent myoblasts.. BMC Mol Cell Biol. 21(1):25.
Venkatesan R, Balaram P, Kalmankar NV.
2021. Mass spectrometric analysis of cyclotides from Clitoria ternatea: Xxx-Pro bond fragmentation as convenient diagnostic of Pro residue positioning.. Chem Asian J.
Venkatesan V, Christopher ACrystal, Rhiel M, Azhagiri MKumar K, Babu P, Walavalkar K, Saravanan B, Andrieux G, Rangaraj S, Srinivasan S et al..
2023. Editing the core region in HPFH deletions alters fetal and adult globin expression for treatment of β-hemoglobinopathies.. Mol Ther Nucleic Acids. 32:671-688.
Venkatasubramani JPriya, Subramanyam P, Pal R, Reddy BK, Srinivasan DJeyalakshm, Chattarji S, Iossifov I, Klann E, Bhattacharya A.
2020. N-terminal variant Asp14Asn of the human p70 S6 Kinase 1 enhances translational signaling causing different effects in developing and mature neuronal cells.. Neurobiol Learn Mem. 171:107203.
Velho N, Srinivasan U, Singh P, Laurance WF.
2016. Large mammal use of protected and community-managed lands in a biodiversity hotspot. ANIMAL CONSERVATION. 19(2):199-208.
Veldman JW, Aleman JC, Alvarado ST, T Anderson M, Archibald S, Bond WJ, Boutton TW, Buchmann N, Buisson E, Canadell JG et al..
2019. Comment on "The global tree restoration potential".. Science. 366(6463)
Veetil RT, Malhotra N, Dubey A, Seshasayee ASai Narain.
2020. Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation.. mSphere. 5(1)
Varudkar A, Ramakrishnan U.
2015. Commensalism facilitates gene flow in mountains: a comparison between two Rattus species.. Heredity (Edinb). 115(3):253-61.
Varudkar A, Ramakrishnan U.
2018. Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in .. Ecol Evol. 8(13):6463-6472.
Varma V., Ratnam J., Viswanathan V., Osuri A.M, Biesmeijer J.C, Madhusudan M.D, Sankaran M..
2015. Perceptions of priority issues in the conservation of biodiversity and ecosystems in India. Biological Conservation . 187:201-211.
Varma V, Sankaran M.
2021. Nutrient deposition enhances post-fire survival in non-N-fixing savanna tree seedlings. JOURNAL OF VEGETATION SCIENCE. 32(2):e13020.
Varma V, Iyengar SB, Sankaran M.
2016. Effects of nutrient addition and soil drainage on germination of N-fixing and non-N-fixing tropical dry forest tree species . Plant Ecology. 217(1043–1054):1043–1054.
Varma V, Catherin AM, Sankaran M.
2018. Effects of increased N and P availability on biomass allocation and root carbohydrate reserves differ between N-fixing and non-N-fixing savanna tree seedlings.. Ecol Evol. 8(16):8467-8476.
Varma A, Udupa S, Sengupta M, Ghosh PKumar, Thirumalai V.
2024. A machine-learning tool to identify bistable states from calcium imaging data.. J Physiol.
Varghese PC, Rajam SM, Nandy D, Jory A, Mukherjee A, Dutta D.
2021. Histone chaperone APLF level dictate implantation of mouse embryo. J Cell Sci. 134(1)
Varahan S, Sinha V, Walvekar A, Krishna S, Laxman S.
2020. Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community . Elife. 9
Varahan S, Walvekar A, Sinha V, Krishna S, Laxman S.
2019. Metabolic constraints drive self-organization of specialized cell groups.. Elife. 8
van Zanten T, Greeshma PS, Mayor S.
2023. Quantitative fluorescence emission anisotropy microscopy for implementing homo-fluorescence resonance energy transfer measurements in living cells. Mol Biol Cell.. 34(6)
Vaishnav A, Shukla AK, Sharma A, Kumar R, Choudhary DK.
2019. Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects. Journal of Plant Growth Regulation. 38(2):650–668.
Vaishnav MS, Kumari N, Srikanta S, Krishnaswamy PR, Balaram P, Bhat N.
2023. Differential Spectrum of Albumin Glycation, Oxidation, and Truncation in Type 2 and Type 1 Diabetes: Clinical and Biological Implications.. Metab Syndr Relat Disord.
Vaishnav MS, Kumari N, Srikanta S, Simha V, Krishnaswamy PR, Balaram P, Bhat N.
2024. Albumin Oxidation and Albumin Glycation Discordance During Type 2 Diabetes Therapy: Biological and Clinical Implications.. Metab Syndr Relat Disord. 22(5):372-384.
U
Urban L, De Niz M, Fernández-Chiappe F, Ebrahimi H, Han LKM, Mehta D, Mencia R, Mittal D, Ochola E, Quezada CPaz et al..
2022. eLife's new model and its impact on science communication.. Elife. 11
Upadhyay AKumar, Sowdhamini R.
2019. Genome-Wide Analysis of Domain-Swap Predicted Products in the Genome of Anti-Stress Medicinal Plant: .. Bioinform Biol Insights. 13:1177932218821362.