2025
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2025. Avenues towards reconciling wild and managed bee proponents.. Trends Ecol Evol. 40(1):7-10.
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2025. From low to high elevations, flowers adapt traits and phenology to climate, but phenology-trait relationships weak. Functional Ecology. :1-14.
Majila K, Arvindekar S, Jindal M, Viswanath S.
2025. Frontiers in integrative structural modeling of macromolecular assemblies. QRB Discovery. 6:e3.
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2025. Future Directions of the Prokaryotic Chromosome Field.. Mol Microbiol. 123(2):89-100.
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2025. Identification of Distinct Rodent-Associated Adenovirus Lineages from Mixed-Use Landscape.. Ecohealth.
Rathore S, Gahlot D, Castin J, Pandey A, Arvindekar S, Viswanath S, Thukral L.
2025. Multiscale simulations reveal architecture of NOTCH protein and ligand specific features.. Biophys J. 124(2):393-407.
2024
Collins DM, Janardan V, Barneda D, Anderson KE, Niewczas I, Taylor D, Qiu D, Jessen HJ, Lopez-Clavijo AF, Walker S et al..
2024. CDS2 expression regulates de novo phosphatidic acid synthesis.. Biochem J. 481(20):1449-1473.
Sreepadmanabh M, Ganesh M, Sanjenbam P, Kurzthaler C, Agashe D, Bhattacharjee T.
2024. Cell shape affects bacterial colony growth under physical confinement.. Nat Commun. 15(1):9561.
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2024. Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature.. iScience. 27(4):109336.
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2024. Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards.. Nat Commun. 15(1):8562.
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2024. Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards.. Nat Commun. 15(1):8562.
Torta F, Hoffmann N, Burla B, Alecu I, Arita M, Bamba T, Bennett SAL, Bertrand-Michel J, Brügger B, Cala MP et al..
2024. Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards.. Nat Commun. 15(1):8562.
Adamala KP, Agashe D, Belkaid Y, Bittencourt DMatias de, Cai Y, Chang MW, Chen IA, Church GM, Cooper VS, Davis MM et al..
2024. Confronting risks of mirror life.. Science. 386(6728):1351-1353.
Adamala KP, Agashe D, Belkaid Y, Bittencourt DMatias de, Cai Y, Chang MW, Chen IA, Church GM, Cooper VS, Davis MM et al..
2024. Confronting risks of mirror life.. Science. 386(6728):1351-1353.
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2024. Constrained dynamics of DNA oligonucleotides in phase-separated droplets.. Biophys J.
Hussain N, Apotikar A, Pidathala S, Mukherjee S, Burada AP, Sikdar SK, Vinothkumar KR, Penmatsa A.
2024. Cryo-EM structures of pannexin 1 and 3 reveal differences among pannexin isoforms.. Nat Commun. 15:2942.
Sreepadmanabh M, Arun AB, Bhattacharjee T.
2024. Design approaches for 3D cell culture and 3D bioprinting platforms.. Biophys Rev (Melville). 5(2):021304.
Agrawal K, Prabhakar S, Bakthavachalu B, Chaturvedi D.
2024. Distinct developmental patterns in Anopheles stephensi organ systems.. Dev Biol. 508:107-122.
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2024. Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces.. mSphere. :e0076524.
Kaur K, Chandel M, Munikrishnappa VKT, Kumar P, Sahu BK, Ahamed M, Manjunath S, Gorantla M, Olsson S, Muthusamy E et al..
2024. Ecofriendly agriculture pest control using pheromone packed programed nanovolcanoes framed by graphene oxide. CLEAN TECHNOLOGIES AND ENVIRONMENTAL POLICY.
Maes S.L, Perring M.P, Cohen R., Akinnifesi F.K, Bargues-Tobella A., Bastin J.-f., Bauters M., Bernardino P.N, Brancalion P.HS, Bullock J.M et al..
2024. Explore before you restore: Incorporating complex systems thinking in ecosystem restoration. JOURNAL OF APPLIED ECOLOGY .
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2024. Generating controlled gust perturbations using vortex rings.. PLoS One. 19(7):e0305084.
Mishra S., Manohar V., Chandel S., Manoj T., Bhattacharya S., Hegde N., Nath V.R., Krishnan H., Wendling C., Mattia T.D. et al..
2024. A genetic screen to uncover mechanisms underlying lipid transfer protein function at membrane contact sites . Life Sci Alliance. 7(6):e202302525.
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2024. Genome-wide association study reveals effect of nsSNPs on candidate genes in rice during iron deficiency.. Funct Integr Genomics. 24(6):198.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Liu X, Zhang Y, Wen Z, Hao Y, Banks CAS, Cesare J, Bhattacharya S, Arvindekar S, Lange JJ, Xie Y et al..
2024. An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.. Proc Natl Acad Sci U S A. 121(33):e2318601121.
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2024. Localisation and function of key axonemal microtubule inner proteins and dynein docking complex members reveal extensive diversity among vertebrate motile cilia.. Development. 151(14)
Srivastava V, Patra K, Pai H, Aguilar-Pontes MVictoria, Berasategui A, Kamble A, Di Pietro A, Redkar A.
2024. Molecular Dialogue During Host Manipulation by the Vascular Wilt Fungus .. Annu Rev Phytopathol. 62(1):97-126.
Singh N, Kaushik R, Prakash A, Saini SSingh, Garg S, Adhikary A, Ladher RK.
2024. Mosaic Atoh1 deletion in the chick auditory epithelium reveals a homeostatic mechanism to restore hair cell number.. Dev Biol. 516:35-46.
Garushyants SK, Sane M, Selifanova MV, Agashe D, Bazykin GA, Gelfand MS.
2024. Mutational signatures in wild type Escherichia coli strains reveal predominance of DNA polymerase errors.. Genome Biol Evol.
Arvindekar S, Pathak AS, Majila K, Viswanath S.
2024. Optimizing representations for integrative structural modeling using Bayesian model selection.. Bioinformatics. 40(3)
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2024. Phytosynthesis of silver nanoparticles using aqueous sandalwood (Santalum album L.) leaf extract: Divergent effects of SW-AgNPs on proliferating plant and cancer cells.. PLoS One. 19(4):e0300115.
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2024. Plant histone variants at the nexus of chromatin readouts, stress and development.. Biochim Biophys Acta Gen Subj. 1868(2):130539.
Chaurasia R, Ayajuddin M, Ratnaparkhi GS, Lingadahalli SS, Yenisetti SC.
2024. A Simple Immunofluorescence Method to Characterize Neurodegeneration and Tyrosine Hydroxylase Reduction in Whole Brain of a Model of Parkinson's Disease.. Bio Protoc. 14(4):e4937.
Mohanakrishnan V, Sivaraj KK, Jeong H-W, Bovay E, Dharmalingam B, M Bixel G, Dinh VVuong, Petkova M, Ugarte IParedes, Kuo Y-T et al..
2024. Specialized post-arterial capillaries facilitate adult bone remodelling.. Nat Cell Biol.
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2024. Structured and disordered regions of Ataxin-2 contribute differently to the specificity and efficiency of mRNP granule formation. PLoS Genetics. 20(20):e1011251.
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2024. Structured and disordered regions of Ataxin-2 contribute differently to the specificity and efficiency of mRNP granule formation. PLoS Genetics. 20(20):e1011251.
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2024. Telomere length sensitive regulation of interleukin receptor 1 type 1 (IL1R1) by the shelterin protein TRF2 modulates immune signalling in the tumour microenvironment.. Elife. 13
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2024. UBR7 in concert with EZH2 inhibits the TGF-β signaling leading to extracellular matrix remodeling.. Cell Rep. 43(7):114394.
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2024. Unraveling the genomic diversity and admixture history of captive tigers in the United States.. Proc Natl Acad Sci U S A. 121(39):e2402924121.
2023
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2023. Alteration of diet microbiota limits the experimentally evolved immune priming response in flour beetles, but not pathogen resistance.. J Evol Biol.
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2023. An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers.. Transl Oncol. 37:101761.
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2023. An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers.. Transl Oncol. 37:101761.
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2023. Benchmarking performance of an automatic polysomnography scoring system in a population with suspected sleep disorders.. Front Neurol. 14:1123935.
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2023. Carbonate budgets in Lakshadweep Archipelago bear the signature of local impacts and global climate disturbances. CORAL REEFS .
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2023. Carbonate budgets in Lakshadweep Archipelago bear the signature of local impacts and global climate disturbances. CORAL REEFS .
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2023. A comparison between time-constrained counts and line transects as methods to estimate butterfly diversity and monitor populations in tropical habitats. INSECT CONSERVATION AND DIVERSITY.
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2023. A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae).. Mol Phylogenet Evol. 183:107758.
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2023. A computational view of short-term plasticity and its implications for E-I balance.. Curr Opin Neurobiol. 81:102729.
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2023. Dedifferentiation and Proliferation of Artery Endothelial Cells Drive Coronary Collateral Development in Mice.. Arterioscler Thromb Vasc Biol.
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2023. Diverse communication strategies in bees as a window into adaptations to an unpredictable world.. Proc Natl Acad Sci U S A. 120(24):e2219031120.
Venkatesan V, Christopher ACrystal, Rhiel M, Azhagiri MKumar K, Babu P, Walavalkar K, Saravanan B, Andrieux G, Rangaraj S, Srinivasan S et al..
2023. Editing the core region in HPFH deletions alters fetal and adult globin expression for treatment of β-hemoglobinopathies.. Mol Ther Nucleic Acids. 32:671-688.
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2023. Editing the core region in HPFH deletions alters fetal and adult globin expression for treatment of β-hemoglobinopathies.. Mol Ther Nucleic Acids. 32:671-688.
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2023. Engineering the kinetic stability of a β-trefoil protein by tuning its topological complexity.. Front Mol Biosci. 10:1021733.
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2023. Environmental heterogeneity modulates the effect of plant diversity on the spatial variability of grassland biomass.. Nat Commun. 14(1):1809.
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2023. The evolution and ecology of multiple antipredator defences.. J Evol Biol.
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2023. The evolution and ecology of multiple antipredator defences.. J Evol Biol.
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2023. The evolution and ecology of multiple antipredator defences.. J Evol Biol.
Kumar VRavi, Agavekar G, Agashe D.
2023. Fitness landscapes reveal context-dependent benefits of oviposition behavior.. Evolution. 77(2):550-561.
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2023. Fitness landscapes reveal context-dependent benefits of oviposition behavior.. Evolution. 77(2):550-561.
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2023. A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins.. Nat Ecol Evol.
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2023. Hemidactylus paucifasciatus (Squamata: Gekkonidae), a new species of large-bodied, tuberculate gecko from Northern Odisha, India. ZOOTAXA . 5301(3):365-382.
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2023. An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells.. Bioinformatics.
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2023. Influence of pH on indole-dependent heterodimeric interactions between Anopheles gambiae odorant-binding proteins OBP1 and OBP4.. Int J Biol Macromol. :125422.
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2023. Isolation, Functionalization, In Silico Investigation, and Synthesis of 1,8-Cineole Analog as Antitubercular Agent Targeting InhA. Russian Journal of Bioorganic Chemistry.
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2023. The layered costs and benefits of translational redundancy.. Elife. 12
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2023. Methyltransferase-independent function of enhancer of zeste homologue 2 maintains tumorigenicity induced by human oncogenic papillomavirus and polyomavirus.. Tumour Virus Res. :200264.
Khattri M, Amako Y, Gibbs JR, Collura JL, Arora R, Harold A, Li MYen, Harms PW, Ezhkova E, Shuda M.
2023. Methyltransferase-independent function of enhancer of zeste homologue 2 maintains tumorigenicity induced by human oncogenic papillomavirus and polyomavirus.. Tumour Virus Res. :200264.
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2023. Multispecies autocatalytic RNA reaction networks in coacervates.. Communications Chemistry. 6(1):91.
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2023. Niacinamide enhances cathelicidin mediated SARS-CoV-2 membrane disruption.. Front Immunol. 14:1255478.
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2023. Opportunities and challenges in Asian bee research and conservation. BIOLOGICAL CONSERVATION . 285:110173.
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2023. Opportunities and challenges in Asian bee research and conservation. BIOLOGICAL CONSERVATION . 285:110173.
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2023. Overcoming the coupled climate and biodiversity crises and their societal impacts.. Science. 380(6642):eabl4881.
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2023. Polyfunctional CD4 T-cells correlating with neutralising antibody is a hallmark of COVISHIELDTM and COVAXIN® induced immunity in COVID-19 exposed Indians.. NPJ Vaccines. 8(1):134.
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2023. Polyfunctional CD4 T-cells correlating with neutralising antibody is a hallmark of COVISHIELDTM and COVAXIN® induced immunity in COVID-19 exposed Indians.. NPJ Vaccines. 8(1):134.
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2023. Polyfunctional CD4 T-cells correlating with neutralising antibody is a hallmark of COVISHIELDTM and COVAXIN® induced immunity in COVID-19 exposed Indians.. NPJ Vaccines. 8(1):134.
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2023. Regulation of store-operated Ca2+ entry by IP3 receptors independent of their ability to release Ca2.. Elife. 12(e80447)
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2023. Revisiting the Role of Genetic Variation in Adaptation. AMERICAN NATURALIST .
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2023. Shifts in mutation spectra enhance access to beneficial mutations.. Proc Natl Acad Sci U S A.. 120(22):e2207355120.
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2023. Structural snapshots of Mycobacterium tuberculosis enolase reveal dual mode of 2PG binding and its implication in enzyme catalysis.. IUCrJ. 10(Pt 6):738-753.
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2023. Synthetic Data Resource and Benchmarks for Time Cell Analysis and Detection Algorithms.. eNeuro.
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2023. Tanshinone IIA targeting cell signaling pathways: a plausible paradigm for cancer therapy.. Pharmacol Rep.
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2023. Tanshinone IIA targeting cell signaling pathways: a plausible paradigm for cancer therapy.. Pharmacol Rep.
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2023. Tolerance to aerial exposure influences distributional patterns in multi-species intertidal seagrass meadows.. Mar Environ Res. 191:106146.
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2023. Tolerance to aerial exposure influences distributional patterns in multi-species intertidal seagrass meadows.. Mar Environ Res. 191:106146.
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2023. Towards evolutionary predictions: Current promises and challenges.. Evol Appl. 16(1):3-21.
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2023. Validating saliva as a biological sample for cost-effective, rapid and routine screening for SARS-CoV-2. INDIAN JOURNAL OF MEDICAL MICROBIOLOGY. 45(100384)
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2022. Active emulsions in living cell membranes driven by contractile stresses and transbilayer coupling. Proc Natl Acad Sci U S A.. 119(30):e2123056119.
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2022. Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
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2022. Chasms in charismatic species research: Seventy years of carnivore science and its implications for conservation and policy in India. BIOLOGICAL CONSERVATION . 273(109694)
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2022. Chronic browsing by an introduced mammalian herbivore in a tropical island alters species composition and functional traits of forest understory plant communities. BIOTROPICA .
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2022. Contrasting Effects of Grazing vs Browsing Herbivores Determine Changes in Soil Fertility in an East African Savanna. ECOSYSTEMS .
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2022. The costs and benefits of basal infection resistance vs immune priming responses in an insect.. Dev Comp Immunol. 126:104261.