C
Khan A, Tyagi A.
2021. Considerations for Initiating a Wildlife Genomics Research Project in South and South-East Asia. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE.
Jaganathan D, Rajakani R, Doddamani D, Saravanan D, Pulipati S, G VHari Sunda, Sellamuthu G, Jayabalan S, Kumari K, Parthasarathy P et al..
2023. A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.. Sci Rep. 13(1):2195.
Narjala A, Nair A, Tirumalai V, G Sundar VHari, Shivaprasad PV.
2020. A conserved sequence signature is essential for robust plant miRNA biogenesis.. Nucleic Acids Res.
Till SM, Asiminas A, Jackson AD, Katsanevaki D, Barnes SA, Osterweil EK, Bear MF, Chattarji S, Wood ER, Wyllie DJA et al..
2015. Conserved hippocampal cellular pathophysiology but distinct behavioural deficits in a new rat model of FXS.. Hum Mol Genet. 24(21):5977-84.
Chatterjee KSankar, Tripathi V, Das R.
2019. A conserved and buried edge-to-face aromatic interaction in Small Ubiquitin-like Modifier (SUMO) has a role in SUMO stability and function.. J Biol Chem.
Singh P, Srivathsa A, Macdonald DW.
2020. Conservation status of the dhole Cuon alpinus in north-east India, with a focus on Dampa Tiger Reserve, Mizoram. ORYX. 54(6):873-877.
Natesh M, Atla G, Nigam P, Jhala YV, Zachariah A, Borthakur U, Ramakrishnan U.
2017. Conservation priorities for endangered Indian tigers through a genomic lens.. Sci Rep. 7(1):9614.
Goheen JR, Augustine DJ, Veblen KE, Kimuyu DM, Palmer TM, Porensky LM, Pringle RM, Ratnam J, Riginos C, Sankaran M et al..
2018. Conservation lessons from large-mammal manipulations in East African savannas: the KLEE, UHURU, and GLADE experiments.. Ann N Y Acad Sci.
Chakrabarti KS, Li J, Das R, R Byrd A.
2017. Conformational Dynamics and Allostery in E2:E3 Interactions Drive Ubiquitination: gp78 and Ube2g2.. Structure.
Vijayasarathy M, Balaram P.
2019. Cone snail prolyl-4-hydroxylase α-subunit sequences derived from transcriptomic data and mass spectrometric analysis of variable proline hydroxylation in C. amadis venom.. J Proteomics. 194:37-48.
Vijayasarathy M, Basheer SM, Balaram P.
2018. Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins.. J Proteome Res. 17(8):2695-2703.
Kumar S, Vijayasarathy M, Venkatesha MA, Sunita P, Balaram P.
2020. Cone snail analogs of the pituitary hormones oxytocin/vasopressin and their carrier protein neurophysin. Proteomic and transcriptomic identification of conopressins and conophysins.. Biochim Biophys Acta Proteins Proteom. :140391.
Asopa A, Bhalla US.
2023. A computational view of short-term plasticity and its implications for E-I balance.. Curr Opin Neurobiol. 81:102729.
Bheemireddy S, Sandhya S, Srinivasan N, Sowdhamini R.
2022. Computational tools to study RNA-protein complexes.. Front Mol Biosci. 9:954926.
Sharma A, Tiwari V, Sowdhamini R.
2020. Computational search for potential COVID-19 drugs from FDAapproved drugs and small molecules of natural origin identifies several anti-virals and plant products.. J Biosci. 45
Karpe SD, Dhingra S, Brockmann A, Sowdhamini R.
2017. Computational genome-wide survey of odorant receptors from two solitary bees Dufourea novaeangliae (Hymenoptera: Halictidae) and Habropoda laboriosa (Hymenoptera: Apidae).. Sci Rep. 7(1):10823.
Harini K, Sowdhamini R.
2015. Computational Approaches for Decoding Select Odorant-Olfactory Receptor Interactions Using Mini-Virtual Screening.. PLoS One. 10(7):e0131077.
Chauhan PKumar, Sowdhamini R.
2023. Computational analysis of the flexibility in the disordered linker region connecting LIM domains in cysteine-glycine-rich protein.. Front Genet. 14:1134509.
Patil P, Skariyachan S, Mutt E, Kaushik S.
2016. Computational Analysis of the Domain Architecture and Substrate-Gating Mechanism of Prolyl Oligopeptidases from Shewanella woodyi and Identification of Probable Lead Molecules.. Interdiscip Sci. 8(3):284-93.
Sharma A, Chandrashekar CR, Krishna S, Sowdhamini R.
2024. Computational Analysis of the Accumulation of Mutations in Therapeutically Important RNA Viral Proteins During Pandemics with Special Emphasis on SARS-CoV-2.. J Mol Biol. 436(19):168716.
K Shafi M, Sowdhamini R.
2022. Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members.. BMC Genomics. 23(1):516.
Pulikkottil VVarghese, Somashekar BPriya, Bhalla US.
2021. Computation, wiring, and plasticity in synaptic clusters.. Curr Opin Neurobiol. 70:101-112.
Gupta A, Sabarinathan R, Bala P, Donipadi V, Vashisht D, Katika MRao, Kandakatla M, Mitra D, Dalal A, Bashyam MDharan.
2021. A comprehensive profile of genomic variations in the SARS-CoV-2 isolates from the state of Telangana, India.. J Gen Virol.
Carvalho APaula S, Owens HL, St Laurent RA, Earl C, Dexter KM, Messcher RL, Willmott KR, Aduse-Poku K, Collins SC, Homziak NT et al..
2024. Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature.. iScience. 27(4):109336.
Condamine FL, Allio R, Reboud EL, Dupuis JR, Toussaint EFA, Mazet N, Hu S-J, Lewis DS, Kunte K, Cotton AM et al..
2023. A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae).. Mol Phylogenet Evol. 183:107758.
Lakshmanan V, N ST, Bansal D, Padubidri SV, Palakodeti D, Krishna S.
2021. Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).. RNA.
Ditlev JA, Vega AR, Köster DVasco, Su X, Tani T, Lakoduk AM, Vale RD, Mayor S, Jaqaman K, Rosen MK.
2019. A composition-dependent molecular clutch between T cell signaling condensates and actin.. Elife. 8
Bakker JD, Price JN, Henning JA, , Sankaran M, et al.
2023. Compositional variation in grassland plant communities. ECOSPHERE . 14(6):e4542.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..
2019. Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.. Wellcome Open Res. 3:44.
Morin DJ, Boulanger J, Bischof R, Lee DC, Ngoprasert D, Fuller AK, McLellan B, Steinmetz R, Sharma S, Garshelis D et al..
2022. Comparison of methods for estimating density and population trends for low-density Asian bears. GLOBAL ECOLOGY AND CONSERVATION. 35(e02058)
Vinothkumar KR, Arya C, Ramanathan G, Subramanian R.
2020. Comparison of CryoEM and X-ray structures of dimethylformamidase.. Prog Biophys Mol Biol.
Attiwilli S, Ravikanthachari N, Kunte K.
2023. A comparison between time-constrained counts and line transects as methods to estimate butterfly diversity and monitor populations in tropical habitats. INSECT CONSERVATION AND DIVERSITY.
Chakravarty R, Chattopadhyay B, Ramakrishnan U.
2018. Comparative Population Structure in Species of Bats Differing in Ecology and Morphology in the Andaman Islands, India. Acta Chiropterologica. 20(1):85-98.
Toussaint EFA, Morinière J, Müller CJ, Kunte K, Turlin B, Axel Hausmann, Balke M.
2015. Comparative molecular species delimitation in the charismatic Nawab butterflies (Nymphalidae, Charaxinae, Polyura).. Mol Phylogenet Evol. 91:194-209.
Khedkar S, Seshasayee ASai Narain.
2016. Comparative Genomics of Interreplichore Translocations in Bacteria: A Measure of Chromosome Topology? G3 (Bethesda). 6(6):1597-606.
Gowda M., Ambardar S., Dighe N., Manjunath A., Shankaralingu C., Hallappa P., Harting J., Ranade S., Jagannathan L., Krishna S..
2016. Comparative analyses of low, medium and high-resolution HLA typing technologies for human populations. Journal of Clinical & Cellular Immunology. 7
Caputi L, Carradec Q, Eveillard D, Kirilovsky A, Pelletier E, Karlusich J, Vieira FRocha Jime, Villar E(, Chaffron S, Malviya S et al..
2019. Community-Level Responses to Iron Availability in Open Ocean Plankton Ecosystems. GLOBAL BIOGEOCHEMICAL CYCLES. 33(3):391-419.
Veldman JW, Aleman JC, Alvarado ST, T Anderson M, Archibald S, Bond WJ, Boutton TW, Buchmann N, Buisson E, Canadell JG et al..
2019. Comment on "The global tree restoration potential".. Science. 366(6463)
Griffith DM, Lehmann CER, Strömberg CAE, Parr CL, R Pennington T, Sankaran M, Ratnam J, Still CJ, Powell RL, Hanan NP et al..
2017. Comment on "The extent of forest in dryland biomes".. Science. 358(6365)
Varudkar A, Ramakrishnan U.
2015. Commensalism facilitates gene flow in mountains: a comparison between two Rattus species.. Heredity (Edinb). 115(3):253-61.
Eriksson O, Bhalla USingh, Blackwell KT, Crook SM, Keller D, Kramer A, Linne M-L, Saudargienė A, Wade RC, Kotaleski JHellgren.
2022. Combining hypothesis- and data-driven neuroscience modeling in FAIR workflows.. Elife. 11
Scolari VF, Lagomarsino MCosentino.
2015. Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid.. Soft Matter. 11(9):1677-87.
Bardgett RD, Bullock JM, Lavorel S, Manning P, Schaffner U, Ostle N, Chomel M, Durigan G, Fry EL, Johnson D et al..
2021. Combatting global grassland degradation. NATURE REVIEWS EARTH & ENVIRONMENT.
Malhotra S, Sowdhamini R.
2015. Collation and analyses of DNA-binding protein domain families from sequence and structural databanks.. Mol Biosyst. 11(4):1110-8.
Radhakrishnan D, Shanmukhan APallipurat, Kareem A, Aiyaz M, Varapparambathu V, Toms A, Kerstens M, Valsakumar D, Landge AN, Shaji A et al..
2020. A coherent feed forward loop drives vascular regeneration in damaged aerial organs growing in normal developmental-context.. Development.
Javali A, Misra A, Leonavicius K, Acharya D, Vyas B, Sambasivan R.
2017. Co-expression of Tbx6 and Sox2 identifies a novel transient neuromesoderm progenitor cell state.. Development.
Alcala N, Goldberg A, Ramakrishnan U, Rosenberg NA.
2019. Coalescent theory of migration network motifs.. Mol Biol Evol.
Brilot AF, Lyon SA, Zelter A, Viswanath S, Maxwell A, MacCoss MJ, Muller EJ, Sali A, Davis TN, Agard DA.
2021. CM1-driven assembly and activation of yeast γ-tubulin small complex underlies microtubule nucleation. Elife. 10
Singha T, Polley A, Barma M.
2023. Clustering of lipids driven by integrin.. Soft Matter. 19(35):6814-6824.
Yamamoto J, Adachi K, Bower JR, Matsui H, Nakaya M, Ohtani R, Puneeta P, Suzuki S, Tokioka S, Vijai D et al..
2019. Close-up observations on the spawning behavior of a captive Japanese flying squid (Todarodes pacificus).. Sci Rep. 9(1):19739.
Silva AP, Mukherjee S, Ramakrishnan U, Fernandes C, Björklund M.
2020. Closely related species show species-specific environmental responses and different spatial conservation needs: Prionailurus cats in the Indian subcontinent.. Sci Rep. 10(1):18705.
Harshita C, Jain D.
2016. Cloning, expression, purification, crystallization and initial crystallographic analysis of FleN from Pseudomonas aeruginosa.. Acta Crystallogr F Struct Biol Commun. 72(Pt 2):135-8.
Ramachandran V, Robin VV, Tamma K, Ramakrishnan U.
2017. Climatic and geographic barriers drive distributional patterns of bird phenotypes within peninsular India. Journal of Avian Biology. 48(5):620-630.
Tyagi A, Godbole M, Vanak ATamim, Ramakrishnan U.
2023. Citizen science facilitates first ever genetic detection of wolf-dog hybridization in Indian savannahs.. Ecol Evol. 13(5):e10100.
Singh AKumar, Walavalkar K, Tavernari D, Ciriello G, Notani D, Sabarinathan R.
2023. Cis-regulatory effect of HPV integration is constrained by host chromatin architecture in cervical cancers.. Mol Oncol.
Chakrabarti S, Michor F.
2020. Circadian clock effects on cellular proliferation: Insights from theory and experiments.. Curr Opin Cell Biol. 67:17-26.
Price BWills, Allan ELouise, Marathe K, Sarkar V, Simon C, Kunte K.
2016. The cicadas (Hemiptera: Cicadidae) of India, Bangladesh, Bhutan, Myanmar, Nepal and Sri Lanka: an annotated provisional catalogue, regional checklist and bibliography.. Biodivers Data J. (4):e8051.
Khouzam RAbou, Sharda M, Rao SPrasad, Kyerewah-Kersi SMaame, Zeinelabdin NAhmed, Mahmood AShah, Nawafleh H, Khan MSamar, Venkatesh GHassan, Chouaib S.
2023. Chronic hypoxia is associated with transcriptomic reprogramming and increased genomic instability in cancer cells.. Front Cell Dev Biol. 11:1095419.
Nishad S, Chauhan PKumar, Sowdhamini R, Ghosh A.
2021. Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.. Sci Rep. 11(1):1777.
Sengupta T, Das R, Chattarji S.
2016. Chronic but not acute immobilization stress stably enhances hippocampal CA1 metabotropic glutamate receptor dependent Long-Term Depression.. Neurosci Lett. 633:101-105.
Anujan K, Ratnam J, Sankaran M.
2022. Chronic browsing by an introduced mammalian herbivore in a tropical island alters species composition and functional traits of forest understory plant communities. BIOTROPICA .
Zhang C, Joseph AMary, Casini L, Collier J, Badrinarayanan A, Manley S.
2024. Chromosome organization shapes replisome dynamics in Caulobacter crescentus.. Nat Commun. 15(1):3460.
Yadav S, Rathod P, Alcoverro T, Arthur R.
2016. Choice and destiny: the substrate composition and mechanical stability of settlement structures can mediate coral recruit fate in post-bleached reefs. Coral Reefs. 35(1):211-222.
Datta V, Hannenhalli S, Siddharthan R.
2019. ChIPulate: A comprehensive ChIP-seq simulation pipeline.. PLoS Comput Biol. 15(3):e1006921.
Malhotra P, Jethva PN, Udgaonkar JB.
2017. Chemical Denaturants Smoothen Ruggedness on the Free Energy Landscape of Protein Folding.. Biochemistry. 56(31):4053-4063.
Srivathsa A, Banerjee A, Banerjee S, Chawla MMathew, Das A, Ganguly D, Rodrigues RG, Adhya T, Bhatia S, Kshettry A et al..
2022. Chasms in charismatic species research: Seventy years of carnivore science and its implications for conservation and policy in India. BIOLOGICAL CONSERVATION . 273(109694)
Yadahalli S, Li J, Lane DP, Gosavi S, Verma CS.
2017. Characterizing the conformational landscape of MDM2-binding p53 peptides using Molecular Dynamics simulations.. Sci Rep. 7(1):15600.
Kaushik PKumar, Renz M, Olsson SB.
2020. Characterizing long-range search behavior in Diptera using complex 3D virtual environments.. Proc Natl Acad Sci U S A. 117(22):12201-12207.
Mak S-S, Alev C, Nagai H, Wrabel A, Matsuoka Y, Honda A, Sheng G, Ladher RK.
2015. Characterization of the finch embryo supports evolutionary conservation of the naive stage of development in amniotes.. Elife. 4:e07178.
Heltberg ML, Krishna S, Jensen MH.
2019. On chaotic dynamics in transcription factors and the associated effects in differential gene regulation.. Nat Commun. 10(1):71.
Ladher RK.
2017. Changing shape and shaping change: Inducing the inner ear.. Semin Cell Dev Biol. 65:39-46.
Winata CLanny, Kondrychyn I, Korzh V.
2015. Changing Faces of Transcriptional Regulation Reflected by Zic3.. Curr Genomics. 16(2):117-27.
Dhawale AKumar, M Kumar A, Sinha A.
2020. Changing ecologies, shifting behaviours: Behavioural responses of a rainforest primate, the lion-tailed macaque Macaca silenus, to a matrix of anthropogenic habitats in southern India.. PLoS One. 15(9):e0238695.
Koerner SE, Smith MD, Burkepile DE, Hanan NP, Avolio ML, Collins SL, Knapp AK, Lemoine NP, Forrestel EJ, Eby S et al..
2018. Change in dominance determines herbivore effects on plant biodiversity.. Nat Ecol Evol.
Raghu P, Sharma Y, Devi ABhuvanendr, Krishnan H.
2024. Challenges and opportunities for discovering the biology of rare genetic diseases of the brain.. J Biosci. 49
Panicker D, Sutaria D, Kumar A, Stafford KM.
2020. Cetacean Distribution and Diversity in Lakshadweep Waters, India, Using a Platform of Opportunity: October 2015 to April 2016. AQUATIC MAMMALS. 46:80-92.
Arumugam S, Schmieder S, Pezeshkian W, Becken U, Wunder C, Chinnapen D, Ipsen JHjort, Kenworthy AK, Lencer W, Mayor S et al..
2021. Ceramide structure dictates glycosphingolipid nanodomain assembly and function.. Nat Commun. 12(1):3675.
Jana SChandra.
2021. Centrosome structure and biogenesis: Variations on a theme? Semin Cell Dev Biol.
S IMeenakshi, Rao M, Mayor S, Sowdhamini R.
2023. A census of actin-associated proteins in humans.. Front Cell Dev Biol. 11:1168050.
Viswanath B, Jose SP, Squassina A, Thirthalli J, Purushottam M, Mukherjee O, Vladimirov V, Patrinos GP, Del Zompo M, Jain S.
2015. Cellular models to study bipolar disorder: A systematic review.. J Affect Disord. 184:36-50.
Iyer KS, Prabhakara C, Mayor S, Rao M.
2023. Cellular compartmentalisation and receptor promiscuity as a strategy for accurate and robust inference of position during morphogenesis. . Elife. :12:e79257.
Domanski APF, Booker SA, Wyllie DJA, Isaac JTR, Kind PC.
2019. Cellular and synaptic phenotypes lead to disrupted information processing in Fmr1-KO mouse layer 4 barrel cortex.. Nat Commun. 10(1):4814.
Ammothumkandy A, Maliekal TThomas, Bose MVahanan, Rajkumar T, Shirley S, Thejaswini B, Giri VG, Krishna S.
2016. CD66 and CD49f expressing cells are associated with distinct neoplastic phenotypes and progression in human cervical cancer.. Eur J Cancer. 60:166-178.
Nayim P, Mbaveng AT, Sanjukta M, Rikesh J, Kuete V, Krishna S.
2021. CD24 gene inhibition and TIMP-4 gene upregulation by Imperata cylindrica's root extract prevents metastasis of CaSki cells via inhibiting PI3K/Akt/snail signaling pathway and blocking EMT. J Ethnopharmacol.
Chanam J, Borges RM.
2017. Cauline domatia of the ant-plant Humboldtia brunonis (Fabaceae). FLORA. 236-237
Kaduskar B, Trivedi D, Ratnaparkhi GS.
2020. Caspar SUMOylation regulates lifespan.. MicroPubl Biol. 2020
Tripathi V, Chatterjee KSankar, Das R.
2019. Casein kinase-2 mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.. J Biol Chem.
Das SG, Rao M, Iyengar G.
2018. Cascade of transitions in molecular information theory. Journal of Statistical Mechanics: Theory and Experiment. Art No. 093402
Moreno-Layseca P, Jäntti NZ, Godbole R, Sommer C, Jacquemet G, Al-Akhrass H, Conway JRW, Kronqvist P, Kallionpää RE, Oliveira-Ferrer L et al..
2021. Cargo-specific recruitment in clathrin- and dynamin-independent endocytosis.. Nat Cell Biol.
Sood P, Murthy K, Kumar V, Nonet ML, Menon GI, Koushika SP.
2018. Cargo crowding at actin-rich regions along axons causes local traffic jams.. Traffic. 19(3):166-181.
Agashe D, Maheshwary S, Pattanaik JKumar, Prakash J, Bhatt P, Arya S.S, Chatterjee S, Kumar P, Singh P, Abbas N et al..
2022. Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
Bagchi B, Seal S, Raina M, Basu DNath, Khan I.
2022. Carcass Scavenging Relaxes Chemical-Driven Female Interference Competition in Flour Beetles. AMERICAN NATURALIST.
Patel FDivan, Pinto W, Dey M, Alcoverro T, Arthur R.
2023. Carbonate budgets in Lakshadweep Archipelago bear the signature of local impacts and global climate disturbances. CORAL REEFS .
Rao VVHemanth, Desikan R, K Ayappa G, Gosavi S.
2016. Capturing the Membrane-Triggered Conformational Transition of an α-Helical Pore-Forming Toxin.. J Phys Chem B. 120(47):12064-12078.
Shah A, Jain R, Brockmann A.
2018. : A Candidate Transcription Factor Involved in Molecular Processes Underlying Time-Memory.. Front Psychol. 9:865.
Pranatharthi A., Ross C., Srivastava S.
2016. Cancer Stem Cells and Radioresistance: Rho/ROCK Pathway Plea Attention. Stem Cells Int. (5785786)
Carlevaro-Fita J, Lanzós A, Feuerbach L, Hong C, Mas-Ponte D, Pedersen JSkou, Johnson R.
2020. Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis.. Commun Biol. 3(1):56.
Garcia-Font N, Mitchell-Heggs R, Saxena K, Gabbert C, Taylor G, Mastroberadino G, Spooner PA, Gobbo F, Dabrowska JK, Chattarji S et al..
2022. Ca2+ imaging of self and other in medial prefrontal cortex during social dominance interactions in a tube test.. Proc Natl Acad Sci U S A. 119(31):e2107942119.
Meena MKumar, Prajapati R, Krishna D, Divakaran K, Pandey Y, Reichelt M, Mathew MK, Boland W, Mithöfer A, Vadassery J.
2019. The Ca2+ Channel CNGC19 Regulates Arabidopsis defense against Spodoptera Herbivory.. Plant Cell.
Mukherjee O, Das G, Sen S, Dutt A, Alladi S, Ghosh A.
2015. C9orf72 mutations may be rare in frontotemporal lobar degeneration patients in India.. Amyotroph Lateral Scler Frontotemporal Degener. :1-3.